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Achievement: Pull Sharkx3Achievement: YOLOAchievement: QuickdrawAchievement: Arctic Code Vault Contributor

Achievements

Achievement: Pull Sharkx3Achievement: YOLOAchievement: QuickdrawAchievement: Arctic Code Vault Contributor

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  1. pSNV-hunter pSNV-hunter Public

    Comprehensive visualization tool / dashboard to investigate and select Promoter SNVs (pSNVs) for downstream validation

    Python 1

  2. REMIND-Cancer REMIND-Cancer Public

    Bioinformatics pipeline to identify and prioritize activating Promoter SNVs (pSNVs) using genomic, transcriptomic and annotation data.

    Jupyter Notebook

  3. genome-tornado-plot-wrapper genome-tornado-plot-wrapper Public

    Analyzing Copy Number Variation (CNV) Events within the PCAWG dataset via GenomeTornadoPlot

    Python

  4. deep-pileup-wrapper deep-pileup-wrapper Public

    Extract and summarize base-level read data from tumor and control BAM files at specific genomic positions to identify potential variant signals across cohorts

    Python 1