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shari01/README.md

Hi 👋, I'm I'm Sheryar Malik

| Bioinformatician | Data Scientist |Machine Learning | NGS | Precision Medicine | Data Analytics | Researcher |

Coding

shari01

  • 🔭 I’m currently working as 🔬 Passionate Bioinformatics Scientist 🧬 | Ayass Bioscience, Texas, USA 🌟

  • 👯 I’m looking to collaborate on bioinformatics projects, especially those involving precision medicine, cancer genomics, machine learning, and multi-omics data analysis.

  • 📫 How to reach me sheryarmalik1403@gmail.com

  • 🚀 Insight The combination of bioinformatics and AI is helping unlock new insights into disease mechanisms faster than ever before, paving the way for personalized medicine!

Connect with me:

@shahryer_malik https://www.linkedin.com/in/sheryar-malik-621182280/ https://www.facebook.com/share/9nrawvmbhvjjxtrp/?mibextid=lqqj4d https://www.instagram.com/shahryer_malik?igsh=czg3dzyxenhnejjy&utm_source=qr

Languages and Tools:

aws bash cplusplus css3 docker gcp html5 java javascript linux matlab opencv pandas python pytorch scikit_learn tensorflow

shari01

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  1. GenAI-Powered-Bioinformatics-Chatbot GenAI-Powered-Bioinformatics-Chatbot Public

    A full-stack LLM-powered chatbot designed for bioscience and clinical research queries — from pathway analysis to molecular Q&A.

    Python 1

  2. PPI-Network-Analysis-Using-STRING-Database PPI-Network-Analysis-Using-STRING-Database Public

    This repository contains a Python-based tool for performing protein-protein interaction (PPI) network analysis using the STRING database. The code identifies critical genes based on their node degr…

    Python

  3. Automated-Gene-Pathway-Enrichment-Analysis-with-STRING-API Automated-Gene-Pathway-Enrichment-Analysis-with-STRING-API Public

    This Python script automates the process of gene pathway enrichment analysis by integrating with the STRING Database API. It reads a list of genes from an input Excel file, queries the STRING datab…

    Python 1

  4. Fine-Tuning-DeepSeek-R1-on-Medical-Reasoning-Chain-of-Thought Fine-Tuning-DeepSeek-R1-on-Medical-Reasoning-Chain-of-Thought Public

    Jupyter Notebook

  5. STRING-Pathway-Enrichment-R-Pipeline STRING-Pathway-Enrichment-R-Pipeline Public

    fully modular R implementation of a pathway enrichment pipeline

    R 1