Search results

Improve code readability

documentationImprovements or additions to documentationImprovements or additions to documentation

enhancementNew feature or requestNew feature or request

Status: Open.

Task

#139 In snakemake-workflows/dna-seq-benchmark;

· famosab opened on Sep 8, 2025

Consider swapping to CRAM files

Status: Open.

Feature

#123 In snakemake-workflows/dna-seq-benchmark;

· famosab opened on Apr 23, 2025

Rethink design of report

enhancementNew feature or requestNew feature or request

Status: Open.

Feature

#121 In snakemake-workflows/dna-seq-benchmark;

· famosab opened on Apr 15, 2025

Streamline the use of <code>.vcf.gz</code> versus <code>.bcf</code>

Status: Open.

Bug

#117 In snakemake-workflows/dna-seq-benchmark;

· famosab opened on Apr 3, 2025

Allow the user to specific their own truth VCF file

Status: Open.

Feature

#103 In snakemake-workflows/dna-seq-benchmark;

· famosab opened on Oct 22, 2024

Somatic Benchmark: Calculate VAF for callers that do not report VAF

Status: Open.

Feature

#100 In snakemake-workflows/dna-seq-benchmark;

· famosab opened on Sep 9, 2024

<code>grch37: false</code> can only be set once while <code>grch37: true</code> can be set per callset

priority

Status: Open.

Bug

#99 In snakemake-workflows/dna-seq-benchmark;

· famosab opened on Sep 3, 2024

P-value sorting happens only per chromosome not globally

Status: Open.

Feature

#97 In snakemake-workflows/dna-seq-benchmark;

· BiancaStoecker opened on Aug 16, 2024