Repositories list

• bids-specification-physio

  Public
  Physiological Data Extension Proposal for the Brain Imaging Data Structure (BIDS) Specification

  Python

  •

  Creative Commons Attribution 4.0 International

  •187•0•9•1•Updated Sep 11, 2025Sep 11, 2025

• physiopy-automations

  Public
  test & document automations used across physiopy repos

  0•0•3•1•Updated Sep 8, 2025Sep 8, 2025

• physiopy.github.io

  Public
  Main website for Physiopy documentation.

  Creative Commons Attribution 4.0 International

  •13•1•13•5•Updated Aug 22, 2025Aug 22, 2025

• peakdet

  Public
  Toolbox for physiological peak detection analyses. Soon to be deprecated in favour of prep4phys

  hacktoberfestphysiological-signalsphysiology+ 1peak-detection

  Python

  •

  Apache License 2.0

  •20•28•5•4•Updated Aug 11, 2025Aug 11, 2025

• physioqc

  Public
  Toolbox for physiological data (Automagic) Quality Control

  qahacktoberfestphysiological-signals+ 3qcphysiologyclosember

  Python

  •

  Apache License 2.0

  •8•3•11•3•Updated Aug 11, 2025Aug 11, 2025

• phys2denoise

  Public
  A toolbox and collection of scripts to prepare physiology data for fMRI denoise

  neuroimagingfmrihacktoberfest+ 3physiological-signalsphysiologyclosember

  Python

  •

  Apache License 2.0

  •19•9•22•7•Updated Aug 11, 2025Aug 11, 2025

• phys2bids

  Public
  Python3 library to format physiological files in BIDS. At the moment, it supports Acqknowledge and Labchart. BrainHack participants, check the issues with the BrainHack labels!

  bidshacktoberfestphysiological-signals+ 9gephysiologypython3-libraryspike2brainwebphysiological-recordingslabchart+ 2

  Python

  •

  Apache License 2.0

  •47•66•49•8•Updated Aug 11, 2025Aug 11, 2025

• prep4phys

  Public
  A toolbox for physiological peak detection analyses. Formerly peakdet.

  hacktoberfestphysiological-signalsphysiology+ 3peak-detectionphysiological-dataclosember

  Python

  •

  Apache License 2.0

  •2•1•24•1•Updated Jul 11, 2025Jul 11, 2025

• physiopy-community-guidelines

  Public
  Repository for Physiopy's community guidelines

  mrineuroimaginghacktoberfest+ 4physiological-signalsphysiologyphysiological-dataclosember

  Python

  •

  Creative Commons Attribution Share Alike 4.0 International

  •3•2•2•0•Updated Jul 11, 2025Jul 11, 2025

• physutils

  Public
  Common tools for the physiopy suite

  bidshacktoberfestphysiological-signals+ 2physiologyclosember

  Python

  •

  Apache License 2.0

  •4•1•3•2•Updated Jul 11, 2025Jul 11, 2025

• physiopy-repository-template

  Public template
  Template repository for physiopy

  templatehacktoberfestphysiological-signals+ 3physiologyphysiological-dataclosember

  Python

  •

  The Unlicense

  •0•1•0•0•Updated Jul 11, 2025Jul 11, 2025

• physiopy

  Public
  Metapackage for physiopy repository

  python3neuroimaginghacktoberfest+ 3physiological-signalsphysiologyclosember

  Python

  •

  Apache License 2.0

  •5•2•3•1•Updated Jul 9, 2025Jul 9, 2025

• .github

  Public
  Creative Commons Attribution 4.0 International

  •0•0•1•0•Updated Jun 23, 2025Jun 23, 2025

• physiopy-governance

  Public
  Governance of physiopy

  Creative Commons Attribution 4.0 International

  •2•0•9•1•Updated Jun 21, 2025Jun 21, 2025

• peakdet2

  Public
  A toolbox for physiological peak detection analyses

  Python

  •

  Apache License 2.0

  •20•0•0•0•Updated Jul 19, 2024Jul 19, 2024

• brainhack-physiopy-2023

  Public
  Web page for Physiopy codesprint x BHG 2023

  HTML

  •2•0•0•0•Updated Dec 1, 2023Dec 1, 2023

• physiopy_tutorial

  Public
  Full tutorial for the physiopy worklows (& friends)

  Apache License 2.0

  •0•1•0•0•Updated Nov 30, 2023Nov 30, 2023

• physiopy-codesprint-spring2023

  Public
  HTML

  •2•0•0•0•Updated Apr 11, 2023Apr 11, 2023

• brainhack-physiopy-2022

  Public
  HTML

  •0•0•0•0•Updated Nov 25, 2022Nov 25, 2022