Evaluation framework for oncology foundation models (FMs)

VMAT modulation complexity index calculator based on https://github.com/victorgabr/ApertureComplexity

Clinical oncology tumor board decision support system made by the Decider project.

scMalignantFinder is a Python package specially designed for analyzing cancer single-cell RNA-seq datasets to distinguish malignant cells from their normal counterparts.

🐝 | From Data to Prognosis: Embedding Multimodal Oncology Data for Precision Medicine

Code from my work as Radiation Physicist Assistant at Cookeville Regional Medical Center

A benchmark of histopathology Foundation Models on multi-stain Immunohistochemistry immune datasets AIM-FM workshop @ NeurIPS 24

Warlock is a snakemake workflow to spawn multiple demons (deme-based oncology models) as jobs running around on a cluster environment 😈😈

Bachelor thesis project analyzing fMRI connectivity and BOLD variability for CRCI biomarker discovery.

Zarządzanie magazynem odpadów radioaktywnych.

Model for early detection of Oral cancer via Histopathological Image datasets

Research code for the investigation of the role of sample size in synthetic data generation.

TransVar - multiway annotator for precision medicine

MCP server to query clinicaltrial.gov to identify mutation specific trials

Tumors detections on MRI slice using semantic segmentation.