Repositories list

• nextfrance

  Public
  Python

  •0•0•0•0•Updated Feb 9, 2024Feb 9, 2024

• primer-schemes

  Public
  Primer schemes for real-time genome epidemiology

  Python

  •

  Creative Commons Attribution 4.0 International

  •42•0•0•0•Updated May 24, 2022May 24, 2022

• ncov2019-artic-nf

  Public
  A Nextflow pipeline for running the ARTIC network's fieldbioinformatics tools (https://github.com/artic-network/fieldbioinformatics), with a focus on ncov2019

  Nextflow

  •

  GNU Affero General Public License v3.0

  •87•1•0•0•Updated Apr 28, 2021Apr 28, 2021

• Protocoles_sequencage

  Public
  Ce repository contient les protocoles de séquencage utilisés par le laboratoire, et sont accessibles à tous.

  0•0•0•0•Updated Feb 5, 2021Feb 5, 2021

• suspicion_variant_SARS-CoV-2

  Public
  partage des documents d'envoi de prélevements.

  0•0•0•0•Updated Jan 11, 2021Jan 11, 2021

• ARTIC_ONT_SARS-CoV-2

  Public
  Python

  •0•0•0•0•Updated Aug 31, 2020Aug 31, 2020

• NGS_SARS-CoV-2_Evaluation_script

  Public
  scripts used for evaluation. See : https://www.biorxiv.org/content/10.1101/2020.07.14.201947v1

  R

  •0•0•0•0•Updated Aug 27, 2020Aug 27, 2020

• WTA_SARS-CoV-2_Pipeline

  Public
  Python

  •0•1•0•0•Updated Aug 4, 2020Aug 4, 2020